miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|109885757|gb|DW514727.1|DW514727 GGACAGTCGAAATATAGGCAAACATGAGCAATTTTATATATCCAAGAAGAAAAAGGGTCTTCCTTTTCAAATCCATAAGT
GACACAAGTACTTACAGTCATCAAAACTACACTGACAAAATGGAGGGGAAAACACTAACCCTAAATTCCCAAATTCCATC
AAATTCAAGAACTAGTAAATTTGGTCACGGCTTTGGTGCCTTCGGAAACGGCGTGTTTCGCGAGTTCTCCAGGAAGAACA
AGTCTAACAGCGGTCTGGATTTCCCTGGAAGTGATGGTGGGCTTCTTGTTGTACCTTGCCAGTCTTGAAGACTCTTGGGC
GAGTTTCTCGAAGATGTCATTGATGAAACTGTTCATGATTCCCATAGCTTTGCTTGAGATACCGATATCTGGATGGACTT
GCTTCAGGACCTTGAAGATGTAGATCTTGTAGGTCTCAACACTCTTCTTGGCTTTCTTCTTCTTCTTATCTCCGGCACCT
GGACCTTCCTTGGGAAGCTTCTTGCCGGCCTTTGGCTTCTTCTCCGCTGGGGCTTTCTCGCCAACGGTGGACTTTTTCTC
CTCCGTTGGCTTCTCGGCAGGCTTCTTCTCAGCGGGCTTTTTCTCGGCTTTCGGCGCCATTGAGATTTCTTTACTT




Most similar to sp|Q1S9I9|H2B1_MEDTR

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q1S9I9|H2B1_MEDTR Probable histone H2B.1 OS=Medicago truncatula
           PE=3 SV=3
          Length = 148

 Score =  178 bits (452), Expect = 2e-44
 Identities = 92/92 (100%), Positives = 92/92 (100%)
 Frame = -2

Query: 443 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSR 264
           SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSR
Sbjct: 57  SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSR 116

Query: 263 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 168
           EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 117 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148